Alex Lemenze's starred repositories
django-cloudrun
Deploy django on Google Cloud Run
Django-registration-and-login-system
This is a user registration and login web-app created using Python, Django
Seurat-to-RNA-Velocity
A guide to using a Seurat object in conjunction with RNA Velocity
rnaseq_tutorial
Informatics for RNA-seq: A web resource for analysis on the cloud. Educational tutorials and working pipelines for RNA-seq analysis including an introduction to: cloud computing, critical file formats, reference genomes, gene annotation, expression, differential expression, alternative splicing, data visualization, and interpretation.
microservices-demo
Sample cloud-first application with 10 microservices showcasing Kubernetes, Istio, and gRPC.
markdown-badges
Badges for your personal developer branding, profile, and projects.
shinyCircos
an R/shiny application for creation of Circos plot interactively
awesome-nextflow
A curated list of nextflow based pipelines
vsn-pipelines
A repository of pipelines for single-cell data in Nextflow DSL2
sra-explorer
Web application to explore the Sequence Read Archive.
awesome-piracy
A curated list of awesome warez and piracy links
scRepertoire
A toolkit for single-cell immune profiling
rnacentral-webcode
RNAcentral website source code
starter-workflows
Accelerating new GitHub Actions workflows
awesome-microbes
List of computational resources for analyzing microbial sequencing data.
clusterProfiler
:bar_chart: A universal enrichment tool for interpreting omics data
scRNAseq-analysis-notes
scRNAseq analysis notes from Ming Tang