Alessio Buccino's repositories
spikeinterface
A Python-based module for creating flexible and robust spike sorting pipelines.
nwbinspector
Tool to help inspect NWB files for compliance with NWB Best Practices
dredge
Robust online multiband drift estimation in electrophysiology data
elephant
Elephant is the Electrophysiology Analysis Toolkit
hdmf-zarr
Zarr I/O backend for HDMF
Kilosort
Fast spike sorting with drift correction for up to a thousand channels
LTS-MIDI-Controller
Design of a MIDI-controller to syncrhonize loopers and synths
mpfi-aind-ephys-job-dispatch
Custom job dispatch capsule to ingest data to AIND ephys pipeline
neuroconv
Create NWB files by converting and combining neural data in proprietary formats and adding essential metadata.
nwb-guide
NWB GUIDE is a desktop app that provides a no-code user interface for converting neurophysiology data to NWB.
nwb-overview
Introduction to NWB software
probeinterface
Python package to handle probe layout, geometry and wiring to device.
pydantic-argparse
Typed Argument Parsing with Pydantic
pykilosort
Python port of Kilosort 2
pynapple
PYthon Neural Analysis Package :pineapple:
pynwb
A Python API for working with Neurodata stored in the NWB Format
python-neo
Neo is a package for representing electrophysiology data in Python, together with support for reading a wide range of neurophysiology file formats
sortingview
Web app for viewing results of ephys spike sorting
spikeinterface-gui
GUI for spikeinterface objects
test-sv-curation
Test repo for sortingview curation
tmp-NWB_Packaging_Subject_Capsule
tmp-NWB_Packaging_Subject_Capsule