ahmadpgh / simDEF

simDEF is an NLP-based model for gene function analysis using Gene Ontology annotations of gene products and proteins.

Home Page:http://kiwi.cs.dal.ca/Software/SimDEF

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What is the recommended memory size?

datduong opened this issue · comments

In step 3, the R code gives the error

SOC <- MF_DEF%%FOC;
Error in .T.2.C(x) %
% .T.2.C(y) :
Cholmod error 'out of memory' at file ../Core/cholmod_memory.c, line 147
Calls: %% -> %% -> %% -> %% -> .Call

What is the recommended memory size? I used 32G and failed.