adiamb

get_common_snps

This python script will take 2 or more snplists as created by PLINK --write-snplist and create a list with common snps found across all the list

plinkMerge

120-Data-Science-Interview-Questions

Answers to 120 commonly asked data science interview questions.

academicpages.github.io

Github Pages template for academic personal websites, forked from mmistakes/minimal-mistakes

adiamb.github.io

Advent2020

Advent of Code 2020 solutions

advent2021

solutions to https://adventofcode.com/

AdventofCode2019

alphafold

Open source code for AlphaFold.

bio

Bioinformatic infrastructure libraries

code_playground

dash-bio

Open-source bioinformatics components for Dash

facenet

Face recognition using Tensorflow

ganttrify

Create beautiful Gantt charts with ggplot2

ghidra

Ghidra is a software reverse engineering (SRE) framework

HIBAG_PARSING

Script to parse HIBAG output and write out a csv file

HLA_HIBAG

igblast

IMPUTE_PIPELINE_MIGNOT_SLURM_VER

This pipeline is a slurm version of the IMPUTE_PIPELINE

kpi

Structural interpretation of Killer cell immunoglobulin-like Receptors (KIR) haplotypes from raw short or long read sequences. It predicts the presence/absence of 16 KIR genes and then uses that to predict pairs of structural (gene-content and order) haplotypes.

libphonenumber

Google's common Java, C++ and JavaScript library for parsing, formatting, and validating international phone numbers.

minorAlleleFreq

MULTI-seq

R implementation of MULTI-seq sample classification workflow

Narcolepsy_immunology_2018

Scripts used in the manuscript titled "Autoimmunity to hypocretin and molecular mimicry to flu in Type 1 narcolepsy"

peptMaker

python-docx

Create and modify Word documents with Python

Remove-duplicate-snps-plink

A python script to remove duplicate snps from plink files and recode the resultant files into plink binaries free of duplicate snps

Scout

Surveillance Detection Scout: Your Lookout on Autopilot

waymo-open-dataset

Waymo Open Dataset

website