Simon Cai's repositories
pytorch_geometric
Geometric Deep Learning Extension Library for PyTorch
BioInfoScripts
Handy scripts for bioinformatics workflows
Detectron
FAIR's research platform for object detection research, implementing popular algorithms like Mask R-CNN and RetinaNet.
gistic20
https://genomebiology.biomedcentral.com/articles/10.1186/gb-2011-12-4-r41
Lhx1-ATAC
For the Lhx1 anchored GRN with ATAC project
limix
Linear mixed model for genomic analyses.
segmentation_models.pytorch
Segmentation models with pretrained backbones. PyTorch.
Mask_RCNN
Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow
mmdetection
Open MMLab Detection Toolbox and Benchmark
MOOC
Online course materials
PyHealth
A Python Library for Healthcare AI
pytorch-singularity
A singularity and docker container to run pytorch in a HPC environment
pyvenn
Python module for plotting Venn diagrams of 2..6 sets
RDS-FMH-CWGS-RW
Immortalisation Study Whole Genome Sequencing
shap
A game theoretic approach to explain the output of any machine learning model.
starter-hugo-academic
🎓 Hugo Academic Theme 创建一个学术网站. Easily create a beautiful academic résumé or educational website using Hugo, GitHub, and Netlify.
URD
URD - Reconstruction of Branching Developmental Trajectories