For each figure panel in the paper, there are three associated directories inside the directory figure_and_experiment_code:
- NAME-plot/
- NAME-run1/
- NAME-run2/
For instance, NAME can be one of figure1-left, figure1-right, figure4-bottom-left, and so on.
To recreate the figures, for say figure1-left do the following:
cd figure1-left-run1
source run_experiment.sh
cd ..
cd figure1-left-run2
source run_experiment.sh
cd ..
cd figure1-left-plot
jupyter run plot_figure.ipynb
The figure will be in figure1-left-plot/outputs/