WALIII's repositories
FinchScope
Single photon tools for Neuroscience
Multiphoton
Gardner Lab LabView 2-Photon Microscope acquisition program
GridSearch
Using the grid mains to sync embedded systems with high precision
HistologySegmentation3D
Segment 3D histology to identify cells that co-express multiple markers
LungDamage
Quantify tissue damage with ML
WALIII.github.io
Personal Website: http://waliii.github.io
ca_source_extraction
Matlab implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.
CaBMI_2D
Repo for 2D BMI analysis, data pointing, and figure generation
CaBMI_ScanImage
Closed loop Ca imaging scripts via ScanIMage
Clancy
Some Scripts to analyze the Clancy paper data
FS_Songbird
FreedomScope Scripts, specifically for analysis of songbird data
ImBat_Seq
Various functions for the ImBat Sequence project
Jupyter-Notebook
Notebooks for analysis, and some code associated with them.
matlab-epsclean
Clean/Repair .eps PostScript vector files created by Matlab R2016b
PreMotor
For Context Paper
RecordingRoom
Pull wav files from recording room