Vina-Wu's repositories
lmt-analysis
Live Mouse Tracker analysis
AllenSDK
code for reading and processing Allen Institute for Brain Science data
amiramesh-reader
Parser for AmiraMesh 3D ASCII 2.0 format
ANTs
Advanced Normalization Tools (ANTs)
calculate_neurons_length
calculate neurons length from swc file
DeepLabCut
Markerless pose estimation of user-defined features with deep learning for all animals
NeuroM
Neuronal Morphology Analysis Tool
OpenCV-Python-Tutorial
OpenCV-Python图像处理教程
pyKinectAzure
Python library to run Kinect Azure DK SDK functions
Python-Arduino-Command-API
A Python library for communicating with Arduino microcontroller boards
single-cell-tutorial
Single cell current best practices tutorial case study for the paper:Luecken and Theis, "Current best practices in single-cell RNA-seq analysis: a tutorial"
skeletonizer
Skeletonizer is a Python tool for converting an Amiramesh skeleton graph, a Blender mesh project file, plus annotations, into a BBPSDK cell morphology.
ThinkDSP
Think DSP: Digital Signal Processing in Python, by Allen B. Downey.
treestoolbox
TREES toolbox
v3d_external
www.vaa3d.org : download the latest Binary version here https://github.com/Vaa3D/release/releases/tag/v3.200
vaa3d_tools
www.vaa3d.org
wholebrain
R package for segmentation, registration and generating web-based brain atlases from microscope images