Giters

Tian312 / PICO_Parser

A clinical BERT-based NLP tool for parsing clinical trial abstracts following the PICO framework

Geek Repo:Geek Repo

Github PK Tool:Github PK Tool

Dataset used and model performance

caolingyu opened this issue · comments

commented

Hi Tian,

I'm interested in your work and have some questions.

  • Did you use PubMed abstracts to train the model? if so, how large is it?
  • Could you provide performance of model on your test data, such as f1 score?

Thanks a lot in advance.

commented

Hi conglingyu,

Thanks for your interests. We pretrained our model on a large dataset of PubMed abstracts and then fine tuned with our own annotation with PICO. Because this is still a nundergoing project, we will release the results once is finished.

Tian