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Theano / Theano

Theano was a Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. It is being continued as PyTensor: www.github.com/pymc-devs/pytensor

Home Page:https://www.github.com/pymc-devs/pytensor

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Dgemm Import Error

J-N-Hamm opened this issue · comments

commented

I'm attempting to use Theano as part of a protein structure prediction pipeline (https://github.com/j3xugit/RaptorX-3DModeling) on a HPC running Red Hat Enterprise 7.5.

Theano was installed using conda-forge. I also tried installing libopenblas as one user suggested in #6573 but that has not resolved it.

Any help would be appreciated.

Error Message:

ImportError: ('The following error happened while compiling the node', BatchedDot(Reshape{3}.0, InplaceDimShuffle{0,2,1}.0), '\n', '/export/lv1/user/jhamm/.theano/compiledir_Linux-3.10-el7.x86_64-x86_64-with-redhat-7.9-Maipo-x86_64-2.7.15-64/tmpmrcbYe/1458b6f7a98e27ca17d298d47d4885740fd3172700b278b1ad12161395532411.so: undefined symbol: dgemm_', '[BatchedDot(<TensorType(float32, 3D)>, <TensorType(float32, 3D)>)]')

commented

Hi, any updates? I also come up with this problem on the same structure prediction pipeline.

commented

This project is already dead. Please go to the fork by pymc3 team here https://github.com/pymc-devs/aesara