CI docker builds fail with AttributeError: cython_sources
glensc opened this issue · comments
The problem
CI builds have started to fail with:
raise AttributeError(attr)
AttributeError: cython_sources
[end of output]
Doesn't seem there's any specific dependency being updated. Same dependencies were built fine before.
For example this PR built fine:
but when merged, it also fails:
Seems the problem is with pyyaml==6.0, pyyaml==6.0.1 installs fine:
docker run --rm python:3.11-alpine3.18 pip install pyyaml==6.0
Collecting pyyaml==6.0
Downloading PyYAML-6.0.tar.gz (124 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.0/125.0 kB 4.1 MB/s eta 0:00:00
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'error'
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> [54 lines of output]
running egg_info
writing lib/PyYAML.egg-info/PKG-INFO
writing dependency_links to lib/PyYAML.egg-info/dependency_links.txt
writing top-level names to lib/PyYAML.egg-info/top_level.txt
Traceback (most recent call last):
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 353, in <module>
main()
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 335, in main
json_out['return_val'] = hook(**hook_input['kwargs'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/usr/local/lib/python3.11/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 118, in get_requires_for_build_wheel
return hook(config_settings)
^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 341, in get_requires_for_build_wheel
return self._get_build_requires(config_settings, requirements=['wheel'])
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 323, in _get_build_requires
self.run_setup()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/build_meta.py", line 338, in run_setup
exec(code, locals())
File "<string>", line 288, in <module>
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/__init__.py", line 107, in setup
return distutils.core.setup(**attrs)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 185, in setup
return run_commands(dist)
^^^^^^^^^^^^^^^^^^
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/core.py", line 201, in run_commands
dist.run_commands()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 969, in run_commands
self.run_command(cmd)
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/dist.py", line 1234, in run_command
super().run_command(command)
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/dist.py", line 988, in run_command
cmd_obj.run()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 314, in run
self.find_sources()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 322, in find_sources
mm.run()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 551, in run
self.add_defaults()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/command/egg_info.py", line 589, in add_defaults
sdist.add_defaults(self)
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/command/sdist.py", line 104, in add_defaults
super().add_defaults()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/sdist.py", line 251, in add_defaults
self._add_defaults_ext()
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/command/sdist.py", line 336, in _add_defaults_ext
self.filelist.extend(build_ext.get_source_files())
^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "<string>", line 204, in get_source_files
File "/tmp/pip-build-env-f1g5oqqm/overlay/lib/python3.11/site-packages/setuptools/_distutils/cmd.py", line 107, in __getattr__
raise AttributeError(attr)
AttributeError: cython_sources
[end of output]
note: This error originates from a subprocess, and is likely not a problem with pip.
error: subprocess-exited-with-error
× Getting requirements to build wheel did not run successfully.
│ exit code: 1
╰─> See above for output.
note: This error originates from a subprocess, and is likely not a problem with pip.
docker run --rm python:3.11-alpine3.18 pip install pyyaml==6.0.1
Collecting pyyaml==6.0.1
Downloading PyYAML-6.0.1.tar.gz (125 kB)
━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━ 125.2/125.2 kB 3.8 MB/s eta 0:00:00
Installing build dependencies: started
Installing build dependencies: finished with status 'done'
Getting requirements to build wheel: started
Getting requirements to build wheel: finished with status 'done'
Preparing metadata (pyproject.toml): started
Preparing metadata (pyproject.toml): finished with status 'done'
Building wheels for collected packages: pyyaml
Building wheel for pyyaml (pyproject.toml): started
Building wheel for pyyaml (pyproject.toml): finished with status 'done'
Created wheel for pyyaml: filename=PyYAML-6.0.1-cp311-cp311-linux_aarch64.whl size=45364 sha256=02254be554d133d4d0fa2b0b1f229cf9bfa6aeb8a7ac95a68fe4824a4fc79352
Stored in directory: /root/.cache/pip/wheels/20/40/04/9edd5f1052f28aff139c0b315b3d5ad7ba893c93ccde03f1b4
Successfully built pyyaml
Installing collected packages: pyyaml
Successfully installed pyyaml-6.0.1
I wonder why dependabot hasn't bumped pyyaml package? 6.0.1 was released on Jul 18, 2023: