Error in do.call(c, singles[-x]) : second argument must be a list

[wwwweber]

Hello!

I am having this error message (Error in do.call(c, singles[-x]) : second argument must be a list) when trying to print the list using ps_venn. Here follows the code:

venn_list <- ps_venn(ps3_dna.t,
"Situation",
fraction = 0.9,
weight = FALSE,
relative = TRUE,
plot = FALSE,
)

venn_list

I am using an agglomerated (genus level) phyloseq object.

Any advice on that?

Thanks in advance!

[Jakob Russel]

Hi

Does it work when you try to plot it, do you get a sensible plot?
When I look at the code it looks like it could fail if all features are found in at least 2 groups, could that be the case with your data?

[Jakob Russel]

No answer