Baqiao Liu's repositories

Language:RustLicense:GPL-3.0Stargazers:3Issues:0Issues:0

internode

Fast implementation of ASTRID-like methods

Language:RustLicense:GPL-3.0Stargazers:2Issues:0Issues:0

ogcat

(yet-to-be) fast and scalable phylogenomic utilities :cat:

Language:RustLicense:GPL-3.0Stargazers:2Issues:0Issues:0

atomicx

Easy-to-use Python atomic variables for cross-thread counters and more

Language:PythonLicense:MITStargazers:1Issues:0Issues:0

connectivity-modifier

better community detection through small cuts

Language:PythonLicense:GPL-3.0Stargazers:1Issues:0Issues:0

gcm137

experimental (unofficial) remake of graph clustering merger

Language:RustLicense:GPL-3.0Stargazers:1Issues:0Issues:0
Language:HTMLStargazers:0Issues:0Issues:0
Language:ChapelLicense:MITStargazers:0Issues:0Issues:0

ASTRID

Fast, accurate species tree estimation. This version has some Python3 bindings.

Language:C++License:GPL-2.0Stargazers:0Issues:0Issues:0

audioio

torchaudio stripped down to bare io

License:BSD-2-ClauseStargazers:0Issues:0Issues:0
Language:RustStargazers:0Issues:0Issues:0

bioconda-recipes

Conda recipes for the bioconda channel.

Stargazers:0Issues:0Issues:0
Language:C#Stargazers:0Issues:0Issues:0

com-amazon-example

example clustering of com.amazon.ungraph.txt from the SNAP dataset

Stargazers:0Issues:0Issues:0
Language:RoffStargazers:0Issues:0Issues:0

fifteen

the library to rule all fifteen unrooted quintets

Language:RustLicense:GPL-3.0Stargazers:0Issues:1Issues:0
Language:RustStargazers:0Issues:0Issues:0
Language:PythonStargazers:0Issues:0Issues:0

MAGUS

Graph Clustering Merger

Language:PythonLicense:MITStargazers:0Issues:0Issues:0
Language:PythonLicense:0BSDStargazers:0Issues:0Issues:0
Language:PythonLicense:0BSDStargazers:0Issues:0Issues:0
Language:PythonLicense:0BSDStargazers:0Issues:0Issues:0
Language:PythonStargazers:0Issues:0Issues:0
Language:JuliaStargazers:0Issues:0Issues:0
Stargazers:0Issues:0Issues:0
Language:SCSSLicense:MITStargazers:0Issues:0Issues:0
Language:PythonStargazers:0Issues:0Issues:0
Language:PythonStargazers:0Issues:0Issues:0
Language:PythonStargazers:0Issues:0Issues:0

WITCH

WITCH is a multiple sequence alignment method that uses multiple weighted HMMs to align unaligned sequences and find consensuses.

Language:PythonLicense:GPL-3.0Stargazers:0Issues:0Issues:0