QiGuangyao

MVGC1

The MVGC Multivariate Granger Causality toolbox for Granger-causal inference from time-series data.

seac

The official code base of Shared Experience Actor-Critic (NeurIPS2020)

pyprobml

Python code for "Probabilistic Machine learning" book by Kevin Murphy

MF3D-Tools

Tools for use with the Macaque Face 3D stimulus set - a parameterized digital 3D model of the Rhesus macaque face

MF3D-docs

Official documentation of the Macaque Face 3D project.

MacaqueBlender

A Python library for parametric control of a 3D rigged macaque face model for visual and social neuroscience

OpenFace

OpenFace – a state-of-the art tool intended for facial landmark detection, head pose estimation, facial action unit recognition, and eye-gaze estimation.

py-feat

Facial Expression Analysis Toolbox

psytrack

pyGLMHMM

A Python implementation of GLM-HMM (port of https://github.com/murthylab/GLMHMM)

PSID

Preferential Subspace Identification Algorithm

DeepFaceLab

DeepFaceLab is the leading software for creating deepfakes.

dbxcli

A command line client for Dropbox built using the Go SDK

ssm-jax

Bayesian learning and inference for state space models (SSMs) using Google Research's JAX as a backend

nanoGPT

The simplest, fastest repository for training/finetuning medium-sized GPTs.

llm-course

Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.

jax

Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more

torchDFINE

ssm

Bayesian learning and inference for state space models

glm-hmm

Code to reproduce figures for "Mice alternate between discrete strategies during perceptual decision-making" from Ashwood, Roy, Stone, IBL, Churchland, Pouget and Pillow (2021)

gazer

Functions for reading and pre-processing eye tracking data.

pupil-size

Matlab scripts for preprocessing pupil size timeseries

DLAG

A dimensionality reduction framework for disentangling the flow of signals between populations of neurons

neurogym

A curated collection of neuroscience tasks with a common interface.

awesome_neuropixels

A curated list of awesome Neuropixels resources.

paper-brain-wide-map

Code related to the brainwide map paper

Pinpoint

Multi-probe trajectory planning in an intuitive 3D environment

cookiecutter-data-science

A logical, reasonably standardized, but flexible project structure for doing and sharing data science work.

bnt

Bayes Net Toolbox for Matlab

Neural_Decoding

A python package that includes many methods for decoding neural activity