PayamDiba

SERGIO

A simulator for single-cell expression data guided by gene regulatory networks

FASTRAL

A hybrid summary method for reconstructing species tree from gene trees

CoNSEPT

Convolutional Neural Network-based Sequence-to-Expression Prediction Tool

CIMLA

Counterfactual Inference by Machine Learning and Attribution Models

CIMLA_data

CS466_Final_Project

This contains an implementation of Convolutional Neural Network for modeling Gene Regulation

CS598JP_CourseProject

This repository contains our code for GRN inference pipeline written for CS598JP course project

CycleGAN

Re-Implementation of CycleGAN for image-to-image translation

Deep_Learning_UIUC

My implementations of Deep Learning models for some supervised and unsupervised applications

GEMSTAT

Thermodynamics-based models of transcriptional regulation by enhancers: the roles of synergistic activation, cooperative binding and short-range repression

GMVAE

Manuscript_tools

styles

Official repository for Citation Style Language (CSL) citation styles.