Get binary rhodo-cyano working with CO2 as sole carbon (ammonia is fine as a nitrogen source)
djinnome opened this issue · comments
Jeremy Zucker commented
Andrew McNaughton commented
Replacing all carbon sources with EX_co2_m
results in small growth for both organisms. Rhodo should not be considered growing in this case...
Compartment | Growth Rate |
---|---|
Rhodosporidium | 0.000017 |
Synechococcus | 0.091490 |
However, when greatly increasing the amount of co2
in the medium from 1.76
to 100
arbitrarily, we do see positive growth.
Compartment | Growth Rate |
---|---|
Rhodosporidium | 0.306351 |
Synechococcus | 2.000000 |
With sucrose exchange between the 2 organisms
compartment
Rhodosporidium -2.039566
Synechococcus 2.039566
medium NaN
Name: EX_sucr_e, dtype: float64