ONERAI's repositories
AI4SCup-LLM-Rank4
AI4S Cup -LLM挑战赛-大模型提取“基因-疾病-药物”知识图谱-解决方案-Rank4
funcfetch
FuncFetch workflow scripts
gReLU
gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.
llama3-from-scratch
llama3 implementation one matrix multiplication at a time
llm-action
本项目旨在分享大模型相关技术原理以及实战经验。
llm-course
Course to get into Large Language Models (LLMs) with roadmaps and Colab notebooks.
LLM101n
LLM101n: Let's build a Storyteller
LLMs-from-scratch
Implementing a ChatGPT-like LLM in PyTorch from scratch, step by step
LucaOne
The LucaOne’s model code.
multiomics-open-research
BulkRNABert: Cancer prognosis from bulk RNA-seq based language models
nanoGPT
The simplest, fastest repository for training/finetuning medium-sized GPTs.
nicheformer
Repository for Nicheformer: a foundation model for single-cell and spatial omics
pertpy
Perturbation Analysis in the scverse ecosystem.
PINNACLE
Contextualizing protein representations using deep learning on protein networks and single-cell data
scPRINT
Single Cell Pretrained Regulatory network INference from Transcripts
spatial-lung-fibrosis
Repository for all R scripts used for the bioinformatic analyses of the mouse and human 10x Genomics Visium spatially resolved transcriptomics data presented in our associated manuscript.
SwissArmyTransformer
SwissArmyTransformer is a flexible and powerful library to develop your own Transformer variants.
TransformerST
A Transformer Model Exploiting Histology Images and Spatial Gene Expression
UNI
Towards a general-purpose foundation model for computational pathology - Nature Medicine