Can not get nextDenovo.sh.done in 03.ctg_graph/03.ctg_cns.sh.work/ctg_cns0 directory

[shehongbing]

Hi,
In the 03.ctg_graph/03.ctg_cns.sh.work/ctg_cns0 directory, I could get the nd.asm.f.part000.fasta but without 'nextDenovo.sh.done'. And the nextDenovo.sh.e is followed:
[INFO] 2021-08-19 05:44:18,225 Corrected step options:
[INFO] 2021-08-19 05:44:18,225 Namespace(alignment_identity_ratio=0.8, alignment_score_ratio=0.8, auto=True, bam_list='/data/pub/liuzy/shehb/ONT/D
[INFO] 2021-08-19 05:44:23,599 Start a corrected worker in 19615 from parent 19602
[INFO] 2021-08-19 05:44:23,608 Start a corrected worker in 19617 from parent 19602
[INFO] 2021-08-19 05:44:23,626 Start a corrected worker in 19621 from parent 19602
[INFO] 2021-08-19 05:44:23,631 Start a corrected worker in 19625 from parent 19602
[INFO] 2021-08-19 05:44:23,634 Start a corrected worker in 19629 from parent 19602
[INFO] 2021-08-19 05:44:23,635 Start a corrected worker in 19640 from parent 19602
[INFO] 2021-08-19 05:44:23,636 Start a corrected worker in 19634 from parent 19602
[INFO] 2021-08-19 05:44:23,639 Start a corrected worker in 19647 from parent 19602
[INFO] 2021-08-19 05:44:23,640 Start a corrected worker in 19655 from parent 19602
[INFO] 2021-08-19 05:44:23,640 Start a corrected worker in 19653 from parent 19602
[INFO] 2021-08-19 07:20:01,987 Start a corrected worker in 23119 from parent 19602

But, in the ctg_cns1 directory, it could work successfully.

[Hu Jiang]

Some of sub-processes are crashed (usually caused by insufficient memory), which blocked the main process. This is a bug of multiprocess module in python. so you should kill the main task, and just rerun the main task.