NatalieZelenka / ontolopy

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v2.0.0 checklist

NatalieZelenka opened this issue · comments

  • Increase test coverage (>80%)
  • Set up Zenodo (#6)
  • tutorials
    • opy.obo (#18)
      • load_obo
      • download_obo
      • create obo from dict with opy.obo
      • merge obos
      • get leaf terms
      • Add more terms to obo
      • Add more attributes to obo term
    • opy.relations
      • get relations between obo terms e.g.
        • disease
        • multi-fate stem cells
        • GO terms, e.g. "differentiating", "secreting hormone"
      • converting to text and what happens if term is not in merged obo?
    • opy.uberon
      • map by name
      • map by ontology term
      • overall + looking at disagreements