MurrellGroup / NextGenSeqUtils.jl

NextGenSeqUtils:

Home Page:https://murrellgroup.github.io/NextGenSeqUtils.jl/

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filtering by expected error rather than average Q-score

ColinAnthony opened this issue · comments

This is a feature request

Filtering sequences by average Q-score has potential issues (as per the links)
https://www.drive5.com/usearch/manual/avgq.html
https://www.drive5.com/usearch/manual/exp_errs.html

Would it be possible to add the option to filter PacBio raw data by expected errors, rather than average Q-score?

This is what we already do.