filtering by expected error rather than average Q-score
ColinAnthony opened this issue · comments
Colin Anthony commented
This is a feature request
Filtering sequences by average Q-score has potential issues (as per the links)
https://www.drive5.com/usearch/manual/avgq.html
https://www.drive5.com/usearch/manual/exp_errs.html
Would it be possible to add the option to filter PacBio raw data by expected errors, rather than average Q-score?
Ben Murrell commented
This is what we already do.