MultiQC / MultiQC

Aggregate results from bioinformatics analyses across many samples into a single report.

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New module MetaPhlAn

almahans opened this issue · comments

Name of the tool

MetaPhlAn

Tool homepage

https://github.com/biobakery/MetaPhlAn

Tool description

"MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data"

Tool output

lil_bub_pe_SRR22078166_metaphlan3-db.metaphlan_profile.txt

Log filename pattern

No response

Data suitable for MultiQC plot(s)

Distribution of most common taxa over multiple samples(similar to Kraken2).

Most interesting data for the General Stats table

Relative abundance of top species (similar to Kraken2).

Before submitting

  • I have included example data (zipped, not pasted) that can be used to write the module.

I have started working on this already.