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When running ./main.py for the first time error with database file permission

MDGrey33 opened this issue · comments

commented

When running ./main.py for the first time error with the database file permission

`/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/bin/python3.12 /Users/roland/code/NurB/Nur/main.py
Traceback (most recent call last):
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 145, in init
self._dbapi_connection = engine.raw_connection()
^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 3282, in raw_connection
return self.pool.connect()
^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 449, in connect
return _ConnectionFairy._checkout(self)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 1263, in _checkout
fairy = _ConnectionRecord.checkout(pool)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 712, in checkout
rec = pool._do_get()
^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/impl.py", line 168, in _do_get
with util.safe_reraise():
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/util/langhelpers.py", line 146, in exit
raise exc_value.with_traceback(exc_tb)
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/impl.py", line 166, in _do_get
return self._create_connection()
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 390, in _create_connection
return _ConnectionRecord(self)
^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 674, in init
self.__connect()
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 900, in __connect
with util.safe_reraise():
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/util/langhelpers.py", line 146, in exit
raise exc_value.with_traceback(exc_tb)
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 896, in __connect
self.dbapi_connection = connection = pool._invoke_creator(self)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/create.py", line 643, in connect
return dialect.connect(*cargs, **cparams)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 616, in connect
return self.loaded_dbapi.connect(*cargs, **cparams)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
sqlite3.OperationalError: unable to open database file

The above exception was the direct cause of the following exception:

Traceback (most recent call last):
File "/Users/roland/code/NurB/Nur/main.py", line 2, in
from confluence_integration.retrieve_space import get_space_content, choose_space
File "/Users/roland/code/NurB/Nur/confluence_integration/retrieve_space.py", line 7, in
from database.nur_database import mark_page_as_processed
File "/Users/roland/code/NurB/Nur/database/nur_database.py", line 395, in
Base.metadata.create_all(engine)
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/sql/schema.py", line 5825, in create_all
bind._run_ddl_visitor(
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 3232, in _run_ddl_visitor
with self.begin() as conn:
File "/opt/homebrew/Cellar/python@3.12/3.12.0/Frameworks/Python.framework/Versions/3.12/lib/python3.12/contextlib.py", line 137, in enter
return next(self.gen)
^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 3222, in begin
with self.connect() as conn:
^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 3258, in connect
return self._connection_cls(self)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 147, in init
Connection._handle_dbapi_exception_noconnection(
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 2422, in _handle_dbapi_exception_noconnection
raise sqlalchemy_exception.with_traceback(exc_info[2]) from e
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 145, in init
self._dbapi_connection = engine.raw_connection()
^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/base.py", line 3282, in raw_connection
return self.pool.connect()
^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 449, in connect
return _ConnectionFairy._checkout(self)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 1263, in _checkout
fairy = _ConnectionRecord.checkout(pool)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 712, in checkout
rec = pool._do_get()
^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/impl.py", line 168, in _do_get
with util.safe_reraise():
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/util/langhelpers.py", line 146, in exit
raise exc_value.with_traceback(exc_tb)
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/impl.py", line 166, in _do_get
return self._create_connection()
^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 390, in _create_connection
return _ConnectionRecord(self)
^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 674, in init
self.__connect()
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 900, in __connect
with util.safe_reraise():
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/util/langhelpers.py", line 146, in exit
raise exc_value.with_traceback(exc_tb)
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/pool/base.py", line 896, in __connect
self.dbapi_connection = connection = pool._invoke_creator(self)
^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/create.py", line 643, in connect
return dialect.connect(*cargs, **cparams)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "/Users/roland/Library/Caches/pypoetry/virtualenvs/nur-n7sGK3Wc-py3.12/lib/python3.12/site-packages/sqlalchemy/engine/default.py", line 616, in connect
return self.loaded_dbapi.connect(*cargs, **cparams)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
sqlalchemy.exc.OperationalError: (sqlite3.OperationalError) unable to open database file
(Background on this error at: https://sqlalche.me/e/20/e3q8)

Process finished with exit code 1

`

commented

Resolved by adding the content folder with its subfolders database file_system and transactional and adding .include in them to make sure they remain in the structure in git.
This is a good enough solution but chances are by mistake the .include file might be deleted and the error might happen again.
I might eventually add a script that creates those folders if they are missing.