KChen-lab / MEDALT

Inference of Minimal Event Distance Aneuploidy Lineage Tree based on single cell copy number profile

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Error during CFL calculation

maurical opened this issue · comments

Hi, this is really good work!
I've installed and run scTree.py, it produce the MEDALT tree but I do get an error during the CFL calculation.
Log below:

[1] Visualization MEDALT!
null device
1
[1] LSA segmentation!
[1] Calculating CFL
Error in subCNV[, startIndex] : incorrect number of dimensions
Calls: do.call -> lapply -> lapply -> FUN
Execution halted
Done!

Any Idea on why this is happening and how can be fixed?
Thank you a lot!

Bests

Hi Maurical,
We have modified the code. Could you please download the source code again and try it? Thanks.