ZMQ build errors

Question

ZMQ build errors

geranim0 opened this issue 8 years ago · comments

Fresh julia, tried multiple times to purge and not working.

`../libtool: eval: line 6461: unexpected EOF while looking for matching ''
../libtool: eval: line 6462: syntax error: unexpected end of file
Makefile:564: recipe for target 'libzmq.la' failed
make[2]: *** [libzmq.la] Error 2
make[2]: Leaving directory '/home/sam/.julia/v0.4/ZMQ/deps/builds/zmq/src'
Makefile:480: recipe for target 'all' failed
make[1]: *** [all] Error 2
make[1]: Leaving directory '/home/sam/.julia/v0.4/ZMQ/deps/builds/zmq/src'
Makefile:352: recipe for target 'all-recursive' failed
make: *** [all-recursive] Error 1
=================================[ ERROR: ZMQ ]=================================

LoadError: failed process: Process(setenv(make -j8,Union{ASCIIString,UTF8String}["PATH=/home/sam/.julia/v0.4/ZMQ/deps/usr/bin:/home/sam/anaconda3/bin:/home/sam/bin:/home/sam/.local/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin","DEFAULTS_PATH=/usr/share/gconf/mate.default.path","QT_ACCESSIBILITY=1","DBUS_SESSION_BUS_ADDRESS=unix:abstract=/tmp/dbus-BMOivbpSLE,guid=4a240dc176360cd0adfc860957db4ebc","XDG_SEAT_PATH=/org/freedesktop/DisplayManager/Seat0","MATE_DESKTOP_SESSION_ID=this-is-deprecated","XDG_SESSION_DESKTOP=mate","GTK_OVERLAY_SCROLLING=0","SSH_AGENT_PID=2194","XDG_SESSION_TYPE=x11","USER=sam","XDG_CONFIG_DIRS=/etc/xdg/xdg-mate:/etc/xdg","QT_IM_MODULE=ibus","LESSCLOSE=/usr/bin/lesspipe %s %s","QT_STYLE_OVERRIDE=gtk","CLUTTER_BACKEND=x11","GDMSESSION=mate","CLUTTER_IM_MODULE=xim","XDG_DATA_DIRS=/usr/share/mate:/usr/share/mate:/usr/local/share/:/usr/share/:/var/lib/snapd/desktop","LESSOPEN=| /usr/bin/lesspipe %s","SHELL=/bin/bash","XDG_SEAT=seat0","XAUTHORITY=/home/sam/.Xauthority","GTK_MODULES=gail:atk-bridge:canberra-gtk-module:topmenu-gtk-module","GTK_IM_MODULE=ibus","SESSION_MANAGER=local/samubuntu:@/tmp/.ICE-unix/2125,unix/samubuntu:/tmp/.ICE-unix/2125","QT_QPA_PLATFORMTHEME=appmenu-qt5","XMODIFIERS=@im=ibus","TERM=xterm","HOME=/home/sam","COLORTERM=mate-terminal","GTK2_MODULES=overlay-scrollbar","COMPIZ_CONFIG_PROFILE=mate","XDG_CURRENT_DESKTOP=MATE","LANG=en_CA.UTF-8","SHLVL=1","LOGNAME=sam","XDG_RUNTIME_DIR=/run/user/1000","SSH_AUTH_SOCK=/run/user/1000/keyring/ssh","DESKTOP_SESSION=mate","GDM_LANG=en_CA","OLDPWD=/home/sam","=bin/julia","PWD=/home/sam/julia-2e358ce975","DISPLAY=:0.0","LANGUAGE=en_CA:en","XDG_GREETER_DATA_DIR=/var/lib/lightdm-data/sam","XDG_SESSION_PATH=/org/freedesktop/DisplayManager/Session1","XDG_VTNR=7","WINDOWID=48234525","MANDATORY_PATH=/usr/share/gconf/mate.mandatory.path","XDG_SESSION_ID=c4","PKG_CONFIG_PATH=/home/sam/.julia/v0.4/ZMQ/deps/usr/lib/pkgconfig","QT_LINUX_ACCESSIBILITY_ALWAYS_ON=1","QT4_IM_MODULE=xim","LS_COLORS=rs=0:di=01;34:ln=01;36:mh=00:pi=40;33:so=01;35:do=01;35:bd=40;33;01:cd=40;33;01:or=40;31;01:mi=00:su=37;41:sg=30;43:ca=30;41:tw=30;42:ow=34;42:st=37;44:ex=01;32:.tar=01;31:.tgz=01;31:.arc=01;31:.arj=01;31:.taz=01;31:.lha=01;31:.lz4=01;31:.lzh=01;31:.lzma=01;31:.tlz=01;31:.txz=01;31:.tzo=01;31:.t7z=01;31:.zip=01;31:.z=01;31:.Z=01;31:.dz=01;31:.gz=01;31:.lrz=01;31:.lz=01;31:.lzo=01;31:.xz=01;31:.bz2=01;31:.bz=01;31:.tbz=01;31:.tbz2=01;31:.tz=01;31:.deb=01;31:.rpm=01;31:.jar=01;31:.war=01;31:.ear=01;31:.sar=01;31:.rar=01;31:.alz=01;31:.ace=01;31:.zoo=01;31:.cpio=01;31:.7z=01;31:.rz=01;31:.cab=01;31:.jpg=01;35:.jpeg=01;35:.gif=01;35:.bmp=01;35:.pbm=01;35:.pgm=01;35:.ppm=01;35:.tga=01;35:.xbm=01;35:.xpm=01;35:.tif=01;35:.tiff=01;35:.png=01;35:.svg=01;35:.svgz=01;35:.mng=01;35:.pcx=01;35:.mov=01;35:.mpg=01;35:.mpeg=01;35:.m2v=01;35:.mkv=01;35:.webm=01;35:.ogm=01;35:.mp4=01;35:.m4v=01;35:.mp4v=01;35:.vob=01;35:.qt=01;35:.nuv=01;35:.wmv=01;35:.asf=01;35:.rm=01;35:.rmvb=01;35:.flc=01;35:.avi=01;35:.fli=01;35:.flv=01;35:.gl=01;35:.dl=01;35:.xcf=01;35:.xwd=01;35:.yuv=01;35:.cgm=01;35:.emf=01;35:.ogv=01;35:.ogx=01;35:.aac=00;36:.au=00;36:.flac=00;36:.m4a=00;36:.mid=00;36:.midi=00;36:.mka=00;36:.mp3=00;36:.mpc=00;36:.ogg=00;36:.ra=00;36:.wav=00;36:.oga=00;36:.opus=00;36:.spx=00;36:_.xspf=00;36:","OPENBLAS_MAIN_FREE=1"]), ProcessExited(2)) [2]
while loading /home/sam/.julia/v0.4/ZMQ/deps/build.jl, in expression starting on line 23`

`WARNING: ZMQ had build errors.

packages with build errors remain installed in /home/sam/.julia/v0.4
build the package(s) and all dependencies with Pkg.build("ZMQ")
build a single package by running its deps/build.jl script
`

Tony Kelman · Answer 1 · Fri Sep 16 2016 12:28:19 GMT+0800 (China Standard Time)

Is it repeatable if you do

rm(Pkg.dir("ZMQ","deps","builds"), recursive=true)
rm(Pkg.dir("ZMQ","deps","downloads"), recursive=true)
rm(Pkg.dir("ZMQ","deps","src"), recursive=true)
rm(Pkg.dir("ZMQ","deps","usr"), recursive=true)
rm(Pkg.dir("ZMQ","deps","deps.jl"))
Pkg.build("ZMQ")

?

un pathologiste · Answer 2 · Fri Sep 16 2016 22:48:10 GMT+0800 (China Standard Time)

When I run your commands I get these errors

julia> rm(Pkg.dir("ZMQ","deps","usr"), recursive=true)
ERROR: unlink: no such file or directory (ENOENT)
in unlink at fs.jl:102
in rm at file.jl:59

julia> rm(Pkg.dir("ZMQ","deps","deps.jl"))
ERROR: unlink: no such file or directory (ENOENT)
in unlink at fs.jl:102
in rm at file.jl:59

and then Pkg.build("ZMQ") fails

Tony Kelman · Answer 3 · Fri Sep 16 2016 22:53:00 GMT+0800 (China Standard Time)

Fails in the exact same way? What kind of Linux distribution is this? Julia versioninfo() ? Always include this kind of information when you report issues.

un pathologiste · Answer 4 · Fri Sep 16 2016 22:54:09 GMT+0800 (China Standard Time)

Yes it fails the same way.

Ubuntu 16.04, mate DE

Julia version:

julia> versioninfo()
Julia Version 0.4.6
Commit 2e358ce (2016-06-19 17:16 UTC)
Platform Info:
System: Linux (x86_64-unknown-linux-gnu)
CPU: Intel(R) Core(TM) i5-4690K CPU @ 3.50GHz
WORD_SIZE: 64
BLAS: libopenblas (USE64BITINT DYNAMIC_ARCH NO_AFFINITY Haswell)
LAPACK: libopenblas64_
LIBM: libopenlibm
LLVM: libLLVM-3.3

Tony Kelman · Answer 5 · Fri Sep 16 2016 23:01:34 GMT+0800 (China Standard Time)

Apparently I have seen this before (though I didn't remember, google remembered for me - https://groups.google.com/forum/#!topic/julia-dev/WnhN9zco_08). Not sure what the solution was there. Maybe gist the file at /home/sam/.julia/v0.4/ZMQ/deps/builds/zmq/libtool or if you can find another libtool script somewhere else in that build tree?

un pathologiste · Answer 6 · Fri Sep 16 2016 23:32:08 GMT+0800 (China Standard Time)

libtool.zip

The only 2 results I get from searching libtool in the build tree are libtool and #libtool# , both in

/home/sam/.julia/v0.4/ZMQ/deps/builds/zmq/

Tony Kelman · Answer 7 · Fri Sep 16 2016 23:45:05 GMT+0800 (China Standard Time)

That doesn't make much sense to me, the lines around 6461-6462 are

void lt_debugprintf (const char *file, int line, const char *fmt, ...);
void lt_fatal (const char *file, int line, const char *message, ...);
static const char *nonnull (const char *s);
static const char *nonempty (const char *s);
void lt_setenv (const char *name, const char *value);
char *lt_extend_str (const char *orig_value, const char *add, int to_end);

which is in some C code that it's probably using to test for or dynamically load shared libraries, something like that.

Are the line numbers in the error message always consistent?

Since you're using ubuntu, maybe you could try installing libzmq from apt-get ? I'm not sure exactly what the package name should be, there currently isn't an apt-get BinDeps provider set up in deps/build.jl.

Tony Kelman · Answer 8 · Fri Sep 16 2016 23:45:57 GMT+0800 (China Standard Time)

Could you record and gist the entire output? The real error message is probably much higher up in the output.

un pathologiste · Answer 9 · Sat Sep 17 2016 00:07:48 GMT+0800 (China Standard Time)

Installing libzmq3-dev did the trick.

Thanks!

Tony Kelman · Answer 10 · Sat Sep 17 2016 00:22:42 GMT+0800 (China Standard Time)

There's some real bug here but it is a pain to debug autotools issues.