Clinical-Genomics / cg

Glue between Clinical Genomics apps

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Missing reference

RasmusBurge-CG opened this issue · comments

Description

Describe the problem/suggestion
enjoyedgrub and qualitynarwhal failed on picardtools. Seems like its looking for /home/proj/production/rare-disease/references/references_12.0/twistexomerefseq_10.2_hg19_design.bed.

This issue is a showstopper for MIP analyses.

Suggested solution

Write here if there is a suggested way to solve the issue

Seems like the someone updated the bait set and forgot to add twistexomerefseq_10.2_hg19_design.bed to the reference folder.

This can be closed when

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Blocked by

If there are any blocking issues/prs/things in this or other repos. Please link to them.