Empty folder creation when cloning cg repo
eliottBo opened this issue · comments
Description
-
When cloning cg repository in VSCode, the following folder appear in my local cg repo:
/cg/home/proj/production/microbial/test/result/microsalt_case_clean
. @ivadym noticed the same problem.
Suggested solution
- No relevant suggestion
This can be closed when
- When cloning the cg repo this folder does not appear.
Blocked by
If there are any blocking issues/prs/things in this or other repos. Please link to them.
Exactly, we have some pytests in tests/cli/clean/test_microbial_clean.py
(test_dry_run
and test_clean_run
) that are generating this folder structure outside the temporary directory path (tmp_path
).