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BMIRDS / deepslide

Code for the Nature Scientific Reports paper "Pathologist-level classification of histologic patterns on resected lung adenocarcinoma slides with deep neural networks." A sliding window framework for classification of high resolution whole-slide images, often microscopy or histopathology images.

Home Page:https://www.nature.com/articles/s41598-019-40041-7

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Data preprocessing problem

Tato14 opened this issue · comments

commented

issue

Hi,

I am having troubles with the preprocessing split/merge scripts. As you see in the attached image, the jpg tiles are not merged properly. All the images that I checked behave similarly. May be some problem in the 3_repiece_jpg_tiles.py?

Thanks

commented

It is hard for me to see where the error occurred based on this screenshot, as I can't match every tile in the right image to the tile in the left.