Jianmin Wang's starred repositories
Awesome-LLM-KG
Awesome papers about unifying LLMs and KGs
smiles-transformer
Original implementation of the paper "SMILES Transformer: Pre-trained Molecular Fingerprint for Low Data Drug Discovery" by Shion Honda et al.
2022-2023-DGM-MIPT-course
Deep Generative Models course, 2022-2023
Structural-Bioinformatics
This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the University of Milano, originally inspired by https://github.com/pb3lab/ibm3202
2022-2023-DGM-AIMasters-course
Deep Generative Models course, AIMasters, 2022
2023-DGM-MIPT-course
Deep Generative Models course, 2023
AI-for-Bio
A free and collaborative space for Machine Learning 🤖 applied to Biology 🧬
DeepRank-GNN-esm
Graph Network for protein-protein interface including language model features
Ligand_Generation
Target-aware Variational Auto-encoders for Ligand Generation with Multimodal Protein Representation Learning
MultiPPIMI
A deep learning framework for predicting interactions between protein-protein interaction targets and modulators
optimalpdb
This script gets 3D structures by taking UniProt ID(s) as input, figures out the currently available PDB structures that are experimentally validated, and chooses the best structure based on lowest resolution (A value). Then it extracts PDB ID(s) that should be retrieved and stores it in a CSV file.
Docking-Based-VS
Docking-Based VS
MultiPPIMI
a deep learning framework for predicting interactions between protein-protein interaction targets and modulators