Docker image

Question

Docker image

davisidarta opened this issue 5 years ago · comments

Hello there, SPRING Team!

I love your web-tool and I particurlaly have been using it a lot to show fellow non-bioinformaticians colleagues my results in an interactive and visual attractive way.

I would like, however, to also be able to run a SPRING docker image of your functioning web-tool at our local computing cluster. This because the current dataset I'm working with is about ~150k cells big, and I think it's too demanding for the web-tool, overloading both your servers and the web connection.

Is there anyway someone on the team might give me some support on building a docker image? It then could be made freely avaiable, bypassing many of the technical issues currently open (requests for more documentation,etc).

I'll be working on this and would very much appreciate some support.

Best regards,

Davi

Caleb Weinreb · Answer 1 · Fri Apr 05 2019 21:25:09 GMT+0800 (China Standard Time)

Hi, Sure we'd be happy to work with you on a docker image! Keep us posted on your progress. The largest SPRING plot I've worked with is about 130,000 cells and its quite cumbersome, but still functional...

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On Wed, Apr 3, 2019 at 10:38 AM davisidarta ***@***.***> wrote: Hello there, SPRING Team! I love your web-tool and I particurlaly have been using it a lot to show fellow non-bioinformaticians colleagues my results in an interactive and visual attractive way. I would like, however, to also be able to run a SPRING docker image of your functioning web-tool at our local computing cluster. This because the current dataset I'm working with is about ~150k cells big, and I think it's too demanding for the web-tool, overloading both your servers and the web connection. Is there anyway someone on the team might give me some support on building a docker image? It then could be made freely avaiable, bypassing many of the technical issues currently open (requests for more documentation,etc). I'll be working on this and would very much appreciate some support. Best regards, Davi — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#11>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AF3OstXgmP4MXOopvNwosKlAZkWuCqsNks5vdLzPgaJpZM4carys> .