AllenInstitute / scrattch.hicat

Hierarchical, iterative clustering for analysis of transcriptomics data in R

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Constellation plots full example

salwanbutrus opened this issue · comments

Hello,

Thank you so much for making this toolbox publically available! I am trying to make a constellation plot like the ones you have in your papers, but I am having a hard time generating the correct input for the get_knn_graph() function. You provide great example csv files for the plot_constellation() function but none for the knn_graph function. Would you mind providing me with example input to that function so that I can tailor my data accordingly?

Thanks,
Salwan