Ali Nematbakhsh's repositories
FARSI_Serial_3D_Monopile
FORTRAN 90 code for solid-fluid interaction
FARSI_MPI_3D
Fluid solid interaction
FARSI_MPI_2D
Fluid solid interaction
FARSI_Serial_2D_Barge
Fortran 90 code for solid-fluid interaction of a barge
FARSI_Serial_2D_Piezo
FORTRAN 90 code for solid-fluid interaction with piezo-electric
FARSI_Serial_2D_VortexShed
FORTRAN 90 code for solid-fluid interaction, vortex hsedding problem
FARSI_Serial_2D_WECCarpet
FORTRAN 90 code for solid-fluid interaction of a wave energy converter carpet shape
FARSI_Serial_3D_TLP
FORTRAN 90 code for solid-fluid interaction of TLP
FARSI_Serial_3D_WECPointAbsorb
FORTRAN 90 code for solid-fluid interaction of a wave energy converter
EpiScale_CrossSection
Studying mechanics of epithelial cells
Episcale_Preprocess_CrossSection
Python code for initializing Episcale cross section model
EpiScale_Signal
A platofrm to couple cell mechanics and cell Signaling for epithelial cells
bioblend_history_update
A python script to extract history urls of histories inside Galaxy
Bioinformatic_Scripts
Small scripts to analyze bioinformatic data
event_subtype_splitter_chexmix
Gets .event file from Chexmix Peak Caller and generate "n" number of .bed files each for one subtype
Galaxy_tools
Bioinformatic Galaxy tools
java_tutorial_cli
Steps to run first java code which uses apache command line
LatinHyperCube
Latin Hyper cube sampling method
postprocess_Episcale_cross_section
Tools to postprocess Episcale_crossSection repository results
PreProcess_EpiScale
Generate a initial setup with arbitrary number of cells for Epi-scale simulation.
SignalTisu
Modeling signalling in tissue
SimVascular
A comprehensive opensource software package providing a complete pipeline from medical image data segmentation to patient specific blood flow simulation and analysis.
Tag_pileup
A bioinformatics tool for tag pileup