Adam D Scott's repositories
23AndMeAndClinVar
Cross-reference 23andMe raw variant file with ClinVar
vcf2ensembl
Convert variants from VCF format to Ensembl format.
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
BCRW_Phenotype_Evolution
Simulation, analysis, data modifications, and helper functions/scripts. All in Matlab. My dissertation research.
machine_learning_coursera
programming assignments from coursera machine learning
Pindel2BAM
Convert Pindel data into SAM & BAM formats.
counties_regions
I helped with a project by generating substance use plots for each county and region in MO.
covid-data-model
Data backend providing computed data for the graphs displayed at https://covidactnow.org
Data-Science-Assignments
Repository for the Data Science learning track to host assignments.
hindmarsh_rose
Hindmarsh-Rose neuron model and analysis for my final nonlinear dynamics course project.
lipowski_lopata_99
Attempting to reproduce the model and results from Lipowski & Lopata's 1999 Phys Rev E paper.
personal_helpful
Helpful scripts & programs
pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
testing_ideas
Random ideas. Nothing to see here.