Giters
Jixiong Su (Achuan-2)

Achuan-2

Geek Repo

72

followers

87

following

315

stars

Company:Fudan University

Location:Shanghai, China

Home Page:https://achuan-2.top/

Twitter:@Tron09616715

Github PK Tool:Github PK Tool

Organizations
siyuan-note

Jixiong Su's starred repositories

vscode

Visual Studio Code

Language:TypeScriptLicense:MITStargazers:161265Issues:3283Issues:180788

markdown-here

Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

Language:JavaScriptLicense:MITStargazers:59599Issues:1030Issues:617

tmux

tmux source code

Language:CLicense:NOASSERTIONStargazers:34055Issues:425Issues:3381

click

Python composable command line interface toolkit

Language:PythonLicense:BSD-3-ClauseStargazers:15383Issues:188Issues:1557

pyecharts

🎨 Python Echarts Plotting Library

Language:PythonLicense:MITStargazers:14695Issues:378Issues:1893

zotero-pdf-translate

Translate PDF, EPub, webpage, metadata, annotations, notes to the target language. Support 20+ translate services.

Language:TypeScriptLicense:AGPL-3.0Stargazers:6680Issues:19Issues:742

Chinese-STD-GB-T-7714-related-csl

GB/T 7714相关的csl以及Zotero使用技巧及教程。

Language:XMLLicense:NOASSERTIONStargazers:4882Issues:18Issues:264

radian

A 21 century R console

Language:PythonLicense:MITStargazers:1976Issues:26Issues:423

seqkit

A cross-platform and ultrafast toolkit for FASTA/Q file manipulation

Language:GoLicense:MITStargazers:1254Issues:28Issues:429

vscode-R

R Extension for Visual Studio Code

Language:TypeScriptLicense:MITStargazers:1058Issues:23Issues:1026

vsearch

Versatile open-source tool for microbiome analysis

Language:C++License:NOASSERTIONStargazers:652Issues:44Issues:532

languageserver

An implementation of the Language Server Protocol for R

Language:RLicense:NOASSERTIONStargazers:573Issues:18Issues:369

phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

Language:RStargazers:572Issues:54Issues:1636

delitemwithatt

Remove attachment(s) when delete the item(s) or collection in Zotero and JurisM.

Language:TypeScriptLicense:AGPL-3.0Stargazers:527Issues:5Issues:33

TrimGalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

Language:PerlLicense:GPL-3.0Stargazers:455Issues:21Issues:175

taxonkit

A Practical and Efficient NCBI Taxonomy Toolkit, also supports creating NCBI-style taxdump files for custom taxonomies like GTDB/ICTV

Language:GoLicense:MITStargazers:363Issues:9Issues:93

picrust2

Code, unit tests, and tutorials for running PICRUSt2

Language:PythonLicense:GPL-3.0Stargazers:311Issues:24Issues:309

chipseq

ChIP-seq peak-calling, QC and differential analysis pipeline.

Language:NextflowLicense:MITStargazers:178Issues:142Issues:178

siyuan-theme-dark-plus

思源笔记的一款多功能双模式主题 | A multifunctional dual-mode theme of SiYuan Note.

Language:CSSLicense:AGPL-3.0Stargazers:137Issues:5Issues:213

STAMP

Statistical Analysis of Metagenomic Profiles

Language:PythonLicense:GPL-3.0Stargazers:90Issues:14Issues:43

CRISPRCasFinder

A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences

Language:PerlLicense:GPL-3.0Stargazers:78Issues:5Issues:51

AstrobioMike.github.io

Site to help biologists wade their way into bioinformatics.

Language:HTMLLicense:NOASSERTIONStargazers:35Issues:7Issues:37

viralrecall

Detection of NCLDV signatures in 'omic data

Language:PythonStargazers:30Issues:3Issues:24

python-note

this is my lern python note

Language:JavaScriptLicense:Apache-2.0Stargazers:22Issues:3Issues:1

GMrepoProgrammableAccess

programmable access to GM repo

License:GPL-3.0Stargazers:19Issues:4Issues:12

PhageHosts

This is the complete code base used in Robert A. Edwards, Katelyn McNair, Karoline Faust, Jeroen Raes, and Bas E. Dutilh (2015) Computational approaches to predict bacteriophage–host relationships. FEMS Microbiology Reviews doi: 10.1093/femsre/fuv048

Language:PythonLicense:MITStargazers:15Issues:7Issues:5

CASC

CASC Ain't Simply CRT

Language:PerlLicense:GPL-3.0Stargazers:11Issues:3Issues:7

phirbo

Predict prokaryotic hosts for phage (meta) genomic sequences

Language:PythonLicense:GPL-3.0Stargazers:10Issues:2Issues:4

vscode-xmind-viewer

Support view xmind in vscode.

Language:TypeScriptStargazers:10Issues:2Issues:3

pilercrpy

Python package for interacting with PILER-CR CRISPR repeat finding output.

Language:HTMLLicense:NOASSERTIONStargazers:9Issues:2Issues:0